SNP Profiles of TSH 516   View Data

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 Key

 1234567891011121314
_Input profile
CGATACGGCTACCGAACTAAAGAGACCT
1._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
2._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
3._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
4._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
5._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
6._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
7._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
8._GC-08-208-6-04
CGATACGGCTACCGAACTAAAGAGACCT
9._GC-08-208-6-04
CGATACGGCTACCGAACTAAAGAGACCT
10._GC-08-208-6-04
CGATACGGCTACCGAACTAAAGAGACCT
11._GC-08-208-6-04
CGATACGGCTACCGAACTAAAGAGACCT
12._GC-08-208-6-04
CGATACGGCTACCGAACTAAAGAGACCT
13._GC-08-208-6-04
CGATACGGCTACCGAACTAAAGAGACCT
14._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
15._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
16._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
17._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
18._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
19._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
20._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
21._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
22._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
23._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
24._TSH_516
CGATACGGCTACCGAACTAAAGAGACCT
25._GC-08-209-6-05
CGATACGGCTACCGAACTAAAGAGACCT
26._GC-08-208-6-04
CGATACGG_ACCGAACTAAAGAGACCT
27._TSH_516
CGATACGG_ACCGAACTAAAGAGACCT
28._RUQ_1018
CGATACGGCTACCGAACTAAAGAGACCT
29._RUQ_1018
__ACGGCTACCGAACTAA_AGACCT
30._RUQ_1018
__AC____AA____AA_
31._GC-08-209-6-05
CGATACGT_ACCCAGCCAAAAAGAACC
32._TSH_516
CGATACGT_ACCCAGCCAAAAAGAACC
33._RUQ_1018
CGATACCCAGACCGAAAGAAAG_AC_
 1516171819202122232425262728
_Input profile
GTCGACAGGTCGCTCTCGATCTAGCTAG
1._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
2._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
3._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
4._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
5._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
6._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
7._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
8._GC-08-208-6-04
GTCGACAGGTCGCTCTCGATCTAGCTAG
9._GC-08-208-6-04
GTCGACAGGTCGCTCTCGATCTAGCTAG
10._GC-08-208-6-04
GTCGACAGGTCGCTCTCGATCTAGCTAG
11._GC-08-208-6-04
GTCGACAGGTCGCTCTCGATCTAGCTAG
12._GC-08-208-6-04
GTCGACAGGTCGCTCTCGATCTAGCTAG
13._GC-08-208-6-04
GTCGACAGGTCGCTCTCGATCTAGCTAG
14._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
15._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
16._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
17._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
18._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
19._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
20._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
21._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
22._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
23._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
24._TSH_516
GTCGACAGGTCGCTCTCGATCTAGCTAG
25._GC-08-209-6-05
GTCGACAGGTCGCTCTCGATCTAGCTAG
26._GC-08-208-6-04
GTCG__GTCG_CTCGATCTAGCTAG
27._TSH_516
GTCG__GTCG_CTCGATCTAGCTAG
28._RUQ_1018
GTCGACGGGTCGCTCTCGATCTAGCTAG
29._RUQ_1018
GTGGAC_GTCG-____AGCT_
30._RUQ_1018
_CGACGGGTCG_____AG_AG
31._GC-08-209-6-05
GGCCACAAGTCGCTCTCGATCTAGCTAG
32._TSH_516
GGCCACAAGTCGCTCTCGATCTAGCTAG
33._RUQ_1018
ACCGAC_ACCGAGAGCGATAGAGAGAG
 2930313233343536373839   
_Input profile
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
1._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
2._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
3._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
4._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
5._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
6._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
7._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
8._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
9._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
10._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
11._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
12._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
13._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
14._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
15._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
16._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
17._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
18._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
19._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
20._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
21._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
22._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
23._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
24._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
25._GC-08-209-6-05
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
26._GC-08-208-6-04
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
27._TSH_516
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
28._RUQ_1018
ATCTCTGTCTACCTCTCGAGCTX_XX_XX_X
29._RUQ_1018
___GT___CTCGAG_X_XX_XX_X
30._RUQ_1018
_CT_GT____CG__X_XX_XX_X
31._GC-08-209-6-05
AACTCTGTCCACCTCCCGAGCTX_XX_XX_X
32._TSH_516
AACTCTGTCCACCTCCCGAGCTX_XX_XX_X
33._RUQ_1018
AT__ACAGACAGAGCGAGAGX_XX_XX_X

Input profile: TSH_516

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 4 > FP
 Dapeng Zhang, 2016

1._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 9
 Dapeng Zhang, 2016

2._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

3._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

4._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

5._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

8._TSH_516 GC-08-208-6-04

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

9._TSH_516 GC-08-208-6-04

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._TSH_516 GC-08-208-6-04

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

11._TSH_516 GC-08-208-6-04

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP1
 Mars, 2018

12._TSH_516 GC-08-208-6-04

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

13._TSH_516 GC-08-208-6-04

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

14._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 10
 Dapeng Zhang, 2016

15._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 7
 Dapeng Zhang, 2016

16._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 6
 Dapeng Zhang, 2016

17._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 3
 Dapeng Zhang, 2016

18._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 2
 Dapeng Zhang, 2016

19._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 1
 Dapeng Zhang, 2016

20._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8604 3 > FP
 Dapeng Zhang, 2016

21._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8604 9
 Dapeng Zhang, 2016

22._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8604 8
 Dapeng Zhang, 2016

23._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8604 2
 Dapeng Zhang, 2016

24._TSH_516

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8604 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

25._TSH_516 GC-08-209-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

26._TSH_516 GC-08-208-6-04

identical
35 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

27._TSH_516

identical
35 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8604 7
 Dapeng Zhang, 2016

28._TSH_516 RUQ_1018

98.7 %
39 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

29._TSH_516 RUQ_1018

97.7 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

30._TSH_516 RUQ_1018

92.3 %
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

31._TSH_516 GC-08-209-6-05

82.9 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

32._TSH_516

82.9 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8605 5
 Dapeng Zhang, 2016

33._TSH_516 RUQ_1018

58.8 %
34 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP226 8TcSNP230 9TcSNP242 10TcSNP372
11TcSNP429 12TcSNP469 13TcSNP529 14TcSNP534 15TcSNP560
16TcSNP577 17TcSNP591 18TcSNP645 19TcSNP723 20TcSNP872
21TcSNP891 22TcSNP917 23TcSNP929 24TcSNP953 25TcSNP994
26TcSNP998 27TcSNP1060 28TcSNP1062 29TcSNP1075 30TcSNP1144
31TcSNP1165 32TcSNP1253 33TcSNP1270 34TcSNP1350 35TcSNP1414
36TcSNP1442 37TcSNP1458 38TcSNP1484 39TcSNP1520